Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.63□□□□□ -1.51
LMO4P61968 OR9A1P-202ENST00000484361 945 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AC112225.1-201ENST00000508230 297 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.63□□□□□ -1.51
LMO4P61968 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 AC091133.5-201ENST00000603088 301 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AC012175.1-201ENST00000603755 531 ntBASIC5.63□□□□□ -1.51
LMO4P61968 NDUFB9P1-201ENST00000604683 510 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AL359091.2-201ENST00000609303 556 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AC026951.2-201ENST00000613847 241 ntBASIC5.63□□□□□ -1.51
LMO4P61968 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.63□□□□□ -1.51
LMO4P61968 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.63□□□□□ -1.51
LMO4P61968 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 AP003175.1-201ENST00000641383 6658 ntBASIC5.63□□□□□ -1.51
LMO4P61968 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LMO4P61968 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMO4P61968 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.63□□□□□ -1.51
LMO4P61968 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.63□□□□□ -1.51
LMO4P61968 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LMO4P61968 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.62□□□□□ -1.51
LMO4P61968 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 RPL24P4-201ENST00000326586 421 ntBASIC5.62□□□□□ -1.51
LMO4P61968 RNA5SP321-201ENST00000362722 111 ntBASIC5.62□□□□□ -1.51
LMO4P61968 RN7SKP250-201ENST00000363924 321 ntBASIC5.62□□□□□ -1.51
LMO4P61968 SNORA64.3-201ENST00000365647 134 ntBASIC5.62□□□□□ -1.51
LMO4P61968 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.62□□□□□ -1.51
LMO4P61968 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 VIM2P-201ENST00000402383 1294 ntBASIC5.62□□□□□ -1.51
LMO4P61968 SNORA11.5-201ENST00000408163 128 ntBASIC5.62□□□□□ -1.51
LMO4P61968 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 THEM7P-201ENST00000419556 672 ntBASIC5.62□□□□□ -1.51
LMO4P61968 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.62□□□□□ -1.51
LMO4P61968 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.62□□□□□ -1.51
LMO4P61968 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.62□□□□□ -1.51
LMO4P61968 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 RPSAP41-201ENST00000439695 860 ntBASIC5.62□□□□□ -1.51
LMO4P61968 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.62□□□□□ -1.51
LMO4P61968 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 AC114982.2-201ENST00000461396 358 ntBASIC5.62□□□□□ -1.51
LMO4P61968 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LMO4P61968 AC091849.1-201ENST00000509920 121 ntBASIC5.62□□□□□ -1.51
LMO4P61968 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.62□□□□□ -1.51
LMO4P61968 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.62□□□□□ -1.51
LMO4P61968 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.62□□□□□ -1.51
LMO4P61968 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.62□□□□□ -1.51
LMO4P61968 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.62□□□□□ -1.51
LMO4P61968 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.62□□□□□ -1.51
LMO4P61968 RAB28P4-201ENST00000622233 665 ntBASIC5.62□□□□□ -1.51
LMO4P61968 AL354702.2-202ENST00000641481 890 ntBASIC5.62□□□□□ -1.51
LMO4P61968 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.62□□□□□ -1.51
LMO4P61968 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 AC089998.1-201ENST00000548575 3141 ntBASIC5.62□□□□□ -1.51
LMO4P61968 AC104837.1-201ENST00000444644 1587 ntBASIC5.62□□□□□ -1.51
LMO4P61968 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO4P61968 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
LMO4P61968 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LMO4P61968 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 SNORA70.3-201ENST00000365075 132 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms