Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 RN7SKP124-201ENST00000364730 341 ntBASIC7.12□□□□□ -1.27
HTTP42858 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HTTP42858 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 RN7SL382P-201ENST00000482631 282 ntBASIC7.12□□□□□ -1.27
HTTP42858 AC074087.1-201ENST00000512059 724 ntBASIC7.12□□□□□ -1.27
HTTP42858 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 AC092121.1-201ENST00000569452 202 ntBASIC7.12□□□□□ -1.27
HTTP42858 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 AL445222.1-201ENST00000607259 628 ntBASIC7.12□□□□□ -1.27
HTTP42858 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 CR383656.5-201ENST00000547616 1340 ntBASIC7.12□□□□□ -1.27
HTTP42858 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 RNA5SP46-201ENST00000362370 120 ntBASIC7.12□□□□□ -1.27
HTTP42858 OR7E101P-201ENST00000400428 513 ntBASIC7.12□□□□□ -1.27
HTTP42858 SNORA11-201ENST00000408789 128 ntBASIC7.12□□□□□ -1.27
HTTP42858 AC245096.1-201ENST00000413104 546 ntBASIC7.12□□□□□ -1.27
HTTP42858 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.12□□□□□ -1.27
HTTP42858 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC7.12□□□□□ -1.27
HTTP42858 CYCSP51-201ENST00000443545 318 ntBASIC7.12□□□□□ -1.27
HTTP42858 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.12□□□□□ -1.27
HTTP42858 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
HTTP42858 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HTTP42858 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 KIF24-202ENST00000402558 6131 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HTTP42858 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.11□□□□□ -1.27
HTTP42858 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 AC022325.1-201ENST00000502748 2199 ntBASIC7.11□□□□□ -1.27
HTTP42858 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.11□□□□□ -1.27
HTTP42858 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.11□□□□□ -1.27
HTTP42858 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 RN7SKP59-201ENST00000410520 314 ntBASIC7.11□□□□□ -1.27
HTTP42858 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.11□□□□□ -1.27
HTTP42858 AL136981.1-203ENST00000451452 3844 ntBASIC7.11□□□□□ -1.27
HTTP42858 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.11□□□□□ -1.27
HTTP42858 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.11□□□□□ -1.27
HTTP42858 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.11□□□□□ -1.27
HTTP42858 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.11□□□□□ -1.27
HTTP42858 FO393422.1-201ENST00000603908 708 ntBASIC7.11□□□□□ -1.27
HTTP42858 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
HTTP42858 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 RNU1-19P-201ENST00000363306 165 ntBASIC7.11□□□□□ -1.27
HTTP42858 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HTTP42858 OR3D1P-201ENST00000438288 955 ntBASIC7.11□□□□□ -1.27
HTTP42858 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.11□□□□□ -1.27
HTTP42858 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 AL450996.1-201ENST00000445574 1202 ntBASIC7.11□□□□□ -1.27
HTTP42858 CBX1P2-201ENST00000453841 458 ntBASIC7.11□□□□□ -1.27
HTTP42858 AC005532.2-201ENST00000467154 373 ntBASIC7.11□□□□□ -1.27
HTTP42858 BX284632.1-201ENST00000478218 541 ntBASIC7.11□□□□□ -1.27
HTTP42858 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.11□□□□□ -1.27
HTTP42858 AC008953.1-201ENST00000497334 318 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms