Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC133644.1-201ENST00000398171 937 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 GAPDHP46-201ENST00000424043 994 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC097721.1-201ENST00000427150 1253 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 SNX18P14-201ENST00000429308 574 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC245047.6-201ENST00000445444 617 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.22□□□□□ -1.57
CXCL1P09341 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 RN7SL571P-201ENST00000468302 295 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC092824.1-201ENST00000483524 576 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.22□□□□□ -1.57
CXCL1P09341 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC012181.2-201ENST00000570210 699 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 AL136141.1-201ENST00000605780 369 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC093388.1-201ENST00000609166 430 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC091768.1-201ENST00000609258 930 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 AC005790.1-201ENST00000619774 450 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC5.22□□□□□ -1.57
CXCL1P09341 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CXCL1P09341 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 VEZF1P1-201ENST00000423931 1541 ntBASIC5.22□□□□□ -1.57
CXCL1P09341 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.22□□□□□ -1.57
CXCL1P09341 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXCL1P09341 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.21□□□□□ -1.57
CXCL1P09341 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
CXCL1P09341 WASF5P-205ENST00000428639 1455 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL1P09341 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 MIR345-201ENST00000362114 98 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 RN7SKP211-201ENST00000363328 315 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 RNU1-16P-201ENST00000365477 164 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 GNG5P2-201ENST00000372054 207 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 HMGB3P1-201ENST00000393368 573 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 NPM1P37-201ENST00000403105 874 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 STSP1-201ENST00000412493 1151 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 VN1R66P-201ENST00000412929 916 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL1P09341 AL390840.1-201ENST00000420303 988 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 FAF2P1-201ENST00000429974 1298 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 NMNAT1P4-201ENST00000505598 840 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC098679.3-203ENST00000514881 919 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC005479.1-201ENST00000554629 451 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 FAM30C-201ENST00000561158 410 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AP003115.1-201ENST00000569849 463 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 RPS7P1-201ENST00000571702 585 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL1P09341 RPL35AP25-201ENST00000584631 330 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 AL390058.1-201ENST00000603834 629 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC122710.3-201ENST00000606566 541 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL1P09341 FLII-230ENST00000628188 156 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC068205.4-201ENST00000637880 804 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 MFSD8-234ENST00000641503 1082 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 AL353763.1-201ENST00000624467 1628 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.21□□□□□ -1.58
CXCL1P09341 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 AC093671.1-201ENST00000624981 2929 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.21□□□□□ -1.58
CXCL1P09341 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 AC007012.2-201ENST00000623206 1676 ntBASIC5.21□□□□□ -1.58
CXCL1P09341 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms