Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL359195.2-201ENST00000623657 4412 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 AC007998.4-201ENST00000612496 2533 ntBASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DRB4X5D2U9 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC125232.1-201ENST00000452554 1408 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 PWRN1-212ENST00000569908 1435 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 API5P1-201ENST00000424316 1510 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC018765.1-201ENST00000623357 3446 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC078880.4-201ENST00000617627 1749 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 U3.48-201ENST00000363172 216 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP333-201ENST00000363466 118 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP334-201ENST00000364825 118 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL353626.3-201ENST00000413399 657 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL604028.2-201ENST00000437848 788 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 HMGN1P6-201ENST00000438508 291 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC091982.1-202ENST00000473923 343 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 RN7SL563P-201ENST00000481233 298 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL591122.1-201ENST00000487348 492 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 RNA5SP518-201ENST00000515957 119 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 SCARNA6-201ENST00000515982 265 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC079866.1-201ENST00000534985 1220 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AP006587.6-201ENST00000582128 1091 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 MIR4786-201ENST00000583954 80 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC015818.6-201ENST00000584274 634 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 OR5M2P-202ENST00000641241 4242 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AL356361.1-201ENST00000400943 1459 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 TPTE2P2-201ENST00000403471 1466 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 AC104837.1-201ENST00000444644 1587 ntBASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DRB4X5D2U9 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AC083806.2-201ENST00000617795 2685 ntBASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AL359263.1-201ENST00000441188 2796 ntBASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AL451142.1-201ENST00000375867 775 ntBASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 AL157698.1-201ENST00000415190 1011 ntBASIC5.23□□□□□ -1.57
HLA-DRB4X5D2U9 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms