Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AP000842.4-201ENST00000638781 748 ntBASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
PPARGC1AQ9UBK2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 THAP12P3-201ENST00000456373 2266 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 RPL31P11-201ENST00000426558 1558 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL136298.2-201ENST00000556497 1570 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 TRIM64EP-201ENST00000531233 1307 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC106754.1-201ENST00000562632 1513 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 OR4K17-201ENST00000315543 1032 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 RPSAP44-201ENST00000406712 884 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC069282.1-201ENST00000411911 526 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 SNX18P13-201ENST00000412442 529 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 PCMTD1P3-201ENST00000451824 472 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 GLRXP3-201ENST00000470810 321 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 LARP7P4-201ENST00000481075 878 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 OR7E13P-201ENST00000526052 910 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 CR382285.1-202ENST00000604687 547 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL136985.2-201ENST00000607372 535 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AC004808.1-201ENST00000627671 721 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 FGL2-202ENST00000637771 989 ntBASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
PPARGC1AQ9UBK2 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 OR4G1P-202ENST00000641173 1788 ntBASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
PPARGC1AQ9UBK2 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AC090643.1-201ENST00000623600 3100 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AC120036.2-201ENST00000509729 1474 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AC127537.1-201ENST00000418183 748 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AL593856.1-201ENST00000419949 805 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 FDPSP1-201ENST00000424976 1071 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 BMP6P1-201ENST00000431230 679 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 CR391992.1-201ENST00000438601 394 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 RPL6P24-201ENST00000445338 864 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 AC008620.1-201ENST00000468453 592 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 RN7SL688P-201ENST00000471754 275 ntBASIC7.58□□□□□ -1.2
PPARGC1AQ9UBK2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms