Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC104581.5-201ENST00000624171 7141 ntBASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
AMBRA1Q9C0C7 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 TRIM60P14-201ENST00000513444 1419 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC018765.1-201ENST00000623357 3446 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 RNU6-564P-201ENST00000410983 104 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC009237.9-201ENST00000414800 347 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 MTND4P11-201ENST00000417020 1058 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC007064.3-201ENST00000422608 359 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 OR5P4P-201ENST00000424698 917 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 SNX18P9-201ENST00000440580 835 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AL353718.1-201ENST00000451028 517 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AP002371.1-201ENST00000463604 433 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 RPL34P22-201ENST00000468193 318 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC131233.1-201ENST00000479200 955 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC118282.1-201ENST00000506408 765 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC133569.1-201ENST00000564327 373 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 MIR3135A-201ENST00000578460 77 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AL049840.6-202ENST00000603373 279 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AL353807.4-201ENST00000604995 257 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AL391834.1-201ENST00000609609 560 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 PART1_3.1-201ENST00000619680 131 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC022960.3-201ENST00000619794 441 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 AC022507.1-201ENST00000548349 1505 ntBASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
AMBRA1Q9C0C7 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 SAMMSON-203ENST00000641005 2168 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL355143.1-201ENST00000407101 841 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 UBE2V1P15-201ENST00000407776 448 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 RN7SKP117-201ENST00000410175 264 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC231533.2-201ENST00000419045 978 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 FDPSP1-201ENST00000424976 1071 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 NDUFA5P1-201ENST00000433858 341 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 AC104698.1-201ENST00000435671 276 ntBASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.69□□□□□ -1.34
AMBRA1Q9C0C7 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms