Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP001528.3-201ENST00000624364 3249 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 RNA5SP145-201ENST00000363124 125 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL035419.1-201ENST00000397037 564 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CYCSP42-201ENST00000450823 238 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 NIPA2P5-201ENST00000452282 464 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 OR9M1P-201ENST00000459641 921 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC004890.1-201ENST00000461005 181 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL672167.3-201ENST00000465951 960 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC011979.1-201ENST00000472300 483 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC104164.4-201ENST00000483456 493 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 RN7SL598P-201ENST00000494391 294 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 MTCYBP18-201ENST00000501056 747 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 TBCA-203ENST00000517679 545 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 FABP5P7-201ENST00000524732 405 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 MPPE1P1-201ENST00000557286 1076 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC013452.1-201ENST00000560630 598 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC087639.1-201ENST00000560974 920 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC007952.7-201ENST00000583141 757 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 RPL7L1P5-201ENST00000590816 738 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL390816.3-201ENST00000604527 1066 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AL049634.3-201ENST00000604968 457 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC026468.1-201ENST00000614981 107 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CU638689.2-201ENST00000623809 818 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC025048.6-202ENST00000627667 438 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 SAMMSON-214ENST00000641395 1264 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC012467.2-201ENST00000607783 2583 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 DDX43P1-201ENST00000510713 1763 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 AC009044.1-201ENST00000624577 1798 ntBASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCUBE3Q8IX30 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AL359922.3-201ENST00000624779 1670 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 OR10J6P-201ENST00000289731 930 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RNU6-931P-201ENST00000363850 107 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 FAT1P1-201ENST00000406588 507 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 MIR1302-11-201ENST00000408051 138 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 MIR1302-9-201ENST00000408365 138 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 MIR1302-10-201ENST00000408734 138 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RN7SKP136-201ENST00000410927 300 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 PNRC2P1-201ENST00000423940 420 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AL354761.1-201ENST00000434190 526 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 TCEA1P3-201ENST00000443005 880 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AL772284.1-201ENST00000443421 905 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 IFNWP5-201ENST00000445100 588 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC073072.2-201ENST00000447425 348 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AP1B1P1-202ENST00000448124 191 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms