Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AC016559.1-201ENST00000511420 199 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 SCARNA6-201ENST00000515982 265 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AC079866.1-201ENST00000534985 1220 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AL031846.1-201ENST00000560933 314 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 RN7SL311P-201ENST00000579858 306 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AC083964.1-201ENST00000607549 630 ntBASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CCDC50Q8IVM0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
CCDC50Q8IVM0 ASNSP6-201ENST00000592770 1618 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 RNA5SP514-201ENST00000363717 111 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 SNORA30B-201ENST00000365319 129 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 FAUP2-201ENST00000394301 401 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 TYMSP1-201ENST00000407851 869 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AL353626.3-201ENST00000413399 657 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 LSM3P3-201ENST00000436601 306 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 PHBP4-201ENST00000437447 837 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC008620.1-201ENST00000468453 592 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 OR10J9P-201ENST00000511932 987 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC103968.1-201ENST00000557841 573 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC113361.1-201ENST00000606683 543 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AP003789.1-201ENST00000617737 605 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC50Q8IVM0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AKAP17BP-201ENST00000431706 2719 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RN7SKP271-201ENST00000410528 320 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RNU2-5P-201ENST00000410533 180 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 GYG1P2-201ENST00000426437 1006 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 RPS21P1-201ENST00000434479 247 ntBASIC7.26□□□□□ -1.25
CCDC50Q8IVM0 AL139135.2-201ENST00000445040 433 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms