Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC079905.1-201ENST00000549280 475 ntBASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 AL591167.1-201ENST00000607321 456 ntBASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 AL136984.1-201ENST00000607611 1893 ntBASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 SPATA31C2-201ENST00000324915 3777 ntBASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42BPAQ5VT25 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 SAGE3P-201ENST00000619800 1635 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 OR5M2P-202ENST00000641241 4242 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 TNC-210ENST00000535648 7508 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 RNA5SP346-201ENST00000363541 121 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 BX119917.1-201ENST00000432517 502 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC025458.1-201ENST00000506046 166 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 NPIPB14P-203ENST00000532298 987 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC106785.4-201ENST00000569492 412 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 AL034417.4-202ENST00000642135 2236 ntBASIC10□□□□□ -0.81
CDC42BPAQ5VT25 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC10□□□□□ -0.81
CDC42BPAQ5VT25 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 SNORA51.9-201ENST00000384295 124 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 SMARCE1P6-201ENST00000398372 1216 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AL663061.1-201ENST00000416625 580 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 DEFA11P-201ENST00000446470 261 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC009963.3-201ENST00000458090 486 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC009879.1-201ENST00000520029 839 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC091768.1-201ENST00000609258 930 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 LINC02495-203ENST00000636704 242 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 OFD1P15Y-201ENST00000411536 1392 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC023818.2-201ENST00000623817 2304 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC093278.2-201ENST00000564956 2485 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 AL035555.1-201ENST00000404462 1790 ntBASIC9.99□□□□□ -0.81
CDC42BPAQ5VT25 IPO7P2-201ENST00000451446 1750 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms