Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC008752.3-201ENST00000588113 712 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC006116.6-201ENST00000593258 1103 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC079089.3-201ENST00000603094 673 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL158063.1-201ENST00000615349 536 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC245389.2-201ENST00000616023 576 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC242843.1-201ENST00000618702 573 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC010608.2-201ENST00000624830 470 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 EIF4BP4-201ENST00000441847 1780 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 HSPD1P10-201ENST00000404829 1676 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC008817.1-201ENST00000504215 1562 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RPE-216ENST00000454822 2130 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC096642.1-201ENST00000612055 2614 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL353898.3-201ENST00000624679 1755 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC099654.3-201ENST00000447087 1546 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RN7SKP50-201ENST00000364694 315 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CXADRP1-201ENST00000398098 1095 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC244157.1-201ENST00000415642 163 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 PAICSP1-201ENST00000425324 1217 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 BX119917.1-201ENST00000432517 502 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC064862.5-201ENST00000440618 334 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CUBNP2-201ENST00000443534 1139 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 FO393419.1-201ENST00000443746 355 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL390026.1-201ENST00000456647 457 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RPL31P58-201ENST00000469001 379 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RPS7P11-201ENST00000484240 586 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 MYL12BP2-201ENST00000503948 512 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC112203.1-201ENST00000506315 1020 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 GOLGA5P1-201ENST00000507317 980 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC016957.1-201ENST00000534895 309 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AGGF1P9-201ENST00000561884 913 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 MIR3611-201ENST00000584484 83 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AL162574.1-201ENST00000615702 950 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 ACTBP13-201ENST00000423971 3959 ntBASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RSPO4Q2I0M5 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms