Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPL39P62891 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPL39P62891 AC130456.1-201ENST00000565085 1363 ntBASIC4.75□□□□□ -1.65
RPL39P62891 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC4.75□□□□□ -1.65
RPL39P62891 AP000547.3-204ENST00000588548 2523 ntBASIC4.75□□□□□ -1.65
RPL39P62891 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.75□□□□□ -1.65
RPL39P62891 RACGAP1P-201ENST00000550663 1879 ntBASIC4.75□□□□□ -1.65
RPL39P62891 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPL39P62891 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC4.75□□□□□ -1.65
RPL39P62891 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 AL513523.1-201ENST00000417868 1309 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 AL451064.2-201ENST00000623514 1654 ntBASIC4.74□□□□□ -1.65
RPL39P62891 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RPL39P62891 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 SNORA51.7-201ENST00000384171 134 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AP003170.5-201ENST00000397185 335 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RPL39P62891 AC007568.1-201ENST00000422912 471 ntBASIC4.74□□□□□ -1.65
RPL39P62891 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AL355355.1-201ENST00000442900 793 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 ATP5G1P6-201ENST00000451206 412 ntBASIC4.74□□□□□ -1.65
RPL39P62891 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 WBP1LP1-201ENST00000460451 896 ntBASIC4.74□□□□□ -1.65
RPL39P62891 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC4.74□□□□□ -1.65
RPL39P62891 AC079944.1-201ENST00000485426 495 ntBASIC4.74□□□□□ -1.65
RPL39P62891 RN7SL187P-201ENST00000495587 303 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC4.74□□□□□ -1.65
RPL39P62891 AC106774.2-201ENST00000510266 406 ntBASIC4.74□□□□□ -1.65
RPL39P62891 IGLVV-66-201ENST00000523818 341 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AP006587.2-201ENST00000530696 493 ntBASIC4.74□□□□□ -1.65
RPL39P62891 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 RN7SL697P-201ENST00000582484 299 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 SIGLEC31P-201ENST00000594237 551 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AL078623.1-201ENST00000602702 907 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC005070.1-201ENST00000603744 365 ntBASIC4.74□□□□□ -1.65
RPL39P62891 RN7SL778P-201ENST00000607160 297 ntBASIC4.74□□□□□ -1.65
RPL39P62891 CNTNAP3P1-201ENST00000616657 906 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC4.74□□□□□ -1.65
RPL39P62891 AC016542.3-201ENST00000623520 619 ntBASIC4.74□□□□□ -1.65
RPL39P62891 AC090099.1-204ENST00000623626 849 ntBASIC4.74□□□□□ -1.65
RPL39P62891 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RPL39P62891 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC4.74□□□□□ -1.65
RPL39P62891 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.74□□□□□ -1.65
RPL39P62891 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RPL39P62891 AKAP17BP-201ENST00000431706 2719 ntBASIC4.74□□□□□ -1.65
RPL39P62891 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.73□□□□□ -1.65
RPL39P62891 AP004289.1-201ENST00000436307 2205 ntBASIC4.73□□□□□ -1.65
RPL39P62891 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.73□□□□□ -1.65
RPL39P62891 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPL39P62891 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms