Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 DPPA3P2-201ENST00000553589 478 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 GAPDHP41-201ENST00000613707 975 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 SNORA16A-202ENST00000628458 135 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RHBDL3P58872 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC107980.1-201ENST00000558671 3355 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
RHBDL3P58872 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
RHBDL3P58872 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.21□□□□□ -1.09
RHBDL3P58872 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
RHBDL3P58872 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RHBDL3P58872 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
RHBDL3P58872 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 SPATA31C2-201ENST00000324915 3777 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.21□□□□□ -1.1
RHBDL3P58872 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 OR56A4-201ENST00000330728 1209 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 PPIAP26-201ENST00000377951 522 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 RPL5P5-201ENST00000392009 893 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.21□□□□□ -1.1
RHBDL3P58872 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.21□□□□□ -1.1
RHBDL3P58872 GSTA6P-201ENST00000424144 582 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 RPL5P34-201ENST00000426545 891 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 RPS10P21-201ENST00000430654 475 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AL590128.1-201ENST00000433407 286 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AL157385.1-201ENST00000446973 268 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 RPL23AP28-201ENST00000448062 470 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 RPL5P9-201ENST00000448118 886 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AC131233.1-201ENST00000479200 955 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC015524.1-201ENST00000491585 472 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 OR2A3P-201ENST00000493774 953 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC055733.3-201ENST00000505214 523 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 GTF2IP11-201ENST00000526931 420 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 OR9G2P-201ENST00000533326 880 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC140063.1-201ENST00000541343 259 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
RHBDL3P58872 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.21□□□□□ -1.1
RHBDL3P58872 AL590032.1-201ENST00000604920 252 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AL390877.1-201ENST00000605704 214 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC068726.1-201ENST00000610993 341 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.21□□□□□ -1.1
RHBDL3P58872 MIR6503-201ENST00000622884 86 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AC005514.1-201ENST00000623521 208 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 AL596275.2-207ENST00000641188 675 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RHBDL3P58872 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.21□□□□□ -1.1
RHBDL3P58872 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.1
RHBDL3P58872 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 AC010132.4-201ENST00000569883 1368 ntBASIC8.21□□□□□ -1.1
RHBDL3P58872 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
RHBDL3P58872 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
RHBDL3P58872 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.21□□□□□ -1.1
RHBDL3P58872 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RHBDL3P58872 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.2□□□□□ -1.1
RHBDL3P58872 AC023818.2-201ENST00000623817 2304 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 AC132219.2-201ENST00000624416 2327 ntBASIC8.2□□□□□ -1.1
RHBDL3P58872 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
RHBDL3P58872 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RHBDL3P58872 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms