Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 RNA5SP448-201ENST00000363151 111 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 RNA5SP115-201ENST00000411160 107 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 STSP1-201ENST00000412493 1151 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 RPL23AP34-201ENST00000423483 410 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC092568.1-201ENST00000440950 1284 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AL139156.3-201ENST00000454802 394 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 RPL12P5-201ENST00000475149 392 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 CR383656.1-201ENST00000484916 377 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 RNA5SP278-201ENST00000517055 102 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC092133.1-201ENST00000565828 719 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 RN7SL667P-201ENST00000582817 298 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AP003068.4-201ENST00000623192 802 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC127071.1-201ENST00000624997 712 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 MAPK10-287ENST00000641217 3037 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 AC007485.2-201ENST00000623493 1667 ntBASIC5.91□□□□□ -1.46
HLA-DMAP28067 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DMAP28067 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DMAP28067 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DMAP28067 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DMAP28067 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DMAP28067 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DMAP28067 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC027575.3-201ENST00000583058 2747 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 SNORA73B-201ENST00000363217 204 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 BMP2KL-201ENST00000414251 1225 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 RPS17P17-201ENST00000419392 409 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL591438.2-201ENST00000452635 691 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 RN7SL571P-201ENST00000468302 295 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 IGLV1-62-201ENST00000518003 441 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC068790.1-201ENST00000536166 355 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AP003115.1-201ENST00000569849 463 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 RPL35AP25-201ENST00000584631 330 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL078623.1-201ENST00000602702 907 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AC005785.2-201ENST00000624655 631 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC5.9□□□□□ -1.46
HLA-DMAP28067 AL139254.2-202ENST00000641937 1156 ntBASIC5.9□□□□□ -1.46
HLA-DMAP28067 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DMAP28067 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DMAP28067 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 AL512353.3-201ENST00000417517 1326 ntBASIC5.9□□□□□ -1.47
HLA-DMAP28067 AC093278.2-201ENST00000564956 2485 ntBASIC5.9□□□□□ -1.47
HLA-DMAP28067 AC011455.2-201ENST00000599320 3336 ntBASIC5.9□□□□□ -1.47
HLA-DMAP28067 AC119674.1-213ENST00000641177 1386 ntBASIC5.9□□□□□ -1.47
HLA-DMAP28067 AC083837.1-201ENST00000565297 2994 ntBASIC5.9□□□□□ -1.47
HLA-DMAP28067 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HLA-DMAP28067 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.9□□□□□ -1.47
HLA-DMAP28067 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DMAP28067 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DMAP28067 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HLA-DMAP28067 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms