Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC006512.2-201ENST00000543250 486 ntBASIC6.52□□□□□ -1.37
COL5A1P20908 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.52□□□□□ -1.37
COL5A1P20908 AC026898.1-201ENST00000586404 571 ntBASIC6.52□□□□□ -1.37
COL5A1P20908 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.52□□□□□ -1.37
COL5A1P20908 AC239803.2-201ENST00000610161 430 ntBASIC6.52□□□□□ -1.37
COL5A1P20908 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL5A1P20908 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL5A1P20908 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
COL5A1P20908 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
COL5A1P20908 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
COL5A1P20908 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.51□□□□□ -1.37
COL5A1P20908 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 FABP5P1-201ENST00000423401 411 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 RPSAP65-201ENST00000429660 595 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 AC110749.1-201ENST00000462007 357 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 AC018645.1-201ENST00000505003 109 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.51□□□□□ -1.37
COL5A1P20908 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.51□□□□□ -1.37
COL5A1P20908 RN7SL199P-201ENST00000578752 281 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 RN7SL656P-201ENST00000579044 281 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 AC111186.1-201ENST00000604684 130 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 MIR6798-201ENST00000612887 67 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
COL5A1P20908 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL5A1P20908 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 AC004014.2-201ENST00000623718 5122 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.51□□□□□ -1.37
COL5A1P20908 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL5A1P20908 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL5A1P20908 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL5A1P20908 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 RN7SKP229-201ENST00000410465 302 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A1P20908 PMS2P9-201ENST00000441237 515 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 NPM1P19-201ENST00000450070 712 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 H3F3AP3-201ENST00000497682 407 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.5□□□□□ -1.37
COL5A1P20908 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.5□□□□□ -1.37
COL5A1P20908 RPL3P13-201ENST00000550415 216 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.5□□□□□ -1.37
COL5A1P20908 SYPL1P2-201ENST00000582878 727 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC114477.1-201ENST00000605097 605 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AL121583.1-201ENST00000612444 682 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AC114546.4-201ENST00000624413 369 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 SNX18P12-201ENST00000624821 759 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 MIR4302-201ENST00000638058 60 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 AL354702.2-202ENST00000641481 890 ntBASIC6.5□□□□□ -1.37
COL5A1P20908 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL5A1P20908 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL5A1P20908 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.5□□□□□ -1.37
COL5A1P20908 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.5□□□□□ -1.37
COL5A1P20908 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms