Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGA1P17096 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGA1P17096 RN7SL649P-201ENST00000496974 275 ntBASIC7.04□□□□□ -1.28
HMGA1P17096 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.04□□□□□ -1.28
HMGA1P17096 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.04□□□□□ -1.28
HMGA1P17096 AL365223.1-201ENST00000574864 1297 ntBASIC7.04□□□□□ -1.28
HMGA1P17096 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC114477.1-201ENST00000605097 605 ntBASIC7.04□□□□□ -1.28
HMGA1P17096 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 AC034229.6-201ENST00000623704 224 ntBASIC7.04□□□□□ -1.28
HMGA1P17096 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.04□□□□□ -1.28
HMGA1P17096 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGA1P17096 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.04□□□□□ -1.28
HMGA1P17096 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
HMGA1P17096 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HMGA1P17096 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
HMGA1P17096 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 PSMC1P4-201ENST00000515236 1327 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 AC245036.1-201ENST00000391727 309 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 OOSP1-201ENST00000398992 1270 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 MIR1204-201ENST00000408388 67 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 MRPS21P5-201ENST00000417885 231 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGA1P17096 PSMC1P2-201ENST00000423961 1204 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HMGA1P17096 BMP6P1-201ENST00000431230 679 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC245047.1-201ENST00000433276 873 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC234771.2-201ENST00000445718 597 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC133965.1-201ENST00000452984 354 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 MARK2P8-201ENST00000476069 952 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 OR9A1P-202ENST00000484361 945 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC093870.1-201ENST00000506837 213 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGA1P17096 AC023310.2-201ENST00000553844 547 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AL591767.3-201ENST00000554632 525 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC025283.1-201ENST00000572039 734 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 SNORA70D-201ENST00000578836 135 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGA1P17096 AC012368.3-201ENST00000604190 219 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 SNORD96A-201ENST00000606577 79 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HMGA1P17096 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 AC079949.2-201ENST00000617117 2933 ntBASIC7.03□□□□□ -1.28
HMGA1P17096 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HMGA1P17096 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGA1P17096 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.28
HMGA1P17096 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGA1P17096 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGA1P17096 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGA1P17096 U3.52-201ENST00000384034 216 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AL663061.1-201ENST00000416625 580 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 AC239367.3-201ENST00000428996 814 ntBASIC7.02□□□□□ -1.29
HMGA1P17096 GAPDHP33-201ENST00000443168 1013 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms