Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 Y_RNA.553-201ENST00000384670 102 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 TYMSP1-201ENST00000407851 869 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL451061.1-201ENST00000407887 862 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 WT1-AS_7.1-201ENST00000426618 294 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC092641.1-201ENST00000440229 772 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 RNU7-125P-201ENST00000458760 62 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL590326.1-201ENST00000460857 334 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC126182.1-201ENST00000478134 357 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 RN7SL635P-201ENST00000492123 296 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC108941.1-201ENST00000502853 530 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 MORF4L2P1-201ENST00000503761 858 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 KRT19P6-201ENST00000510983 209 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 Y_RNA.702-201ENST00000516843 96 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 SCARNA11.1-201ENST00000516918 132 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 EGLN3P1-201ENST00000541727 720 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 FDPSP3-201ENST00000556903 1013 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC044860.3-201ENST00000559957 368 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC142086.3-201ENST00000563896 802 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 BGLT3-201ENST00000564523 994 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC005262.1-201ENST00000588562 362 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AL021918.1-201ENST00000603933 236 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AP005229.2-201ENST00000609980 697 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 AC008895.1-201ENST00000624074 2622 ntBASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RSPO4Q2I0M5 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL022323.2-201ENST00000623239 3000 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 MAPK10-316ENST00000641430 2285 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 RNU4-4P-201ENST00000364588 130 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 MIR191-201ENST00000384873 92 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL358178.1-201ENST00000407698 397 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 TIMM8AP1-201ENST00000419283 295 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC016724.1-201ENST00000453215 421 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 PTGES3P5-201ENST00000455109 434 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 OSTCP1-201ENST00000455507 450 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 NIPA2P2-201ENST00000496376 1083 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 OR5G1P-201ENST00000525221 946 ntBASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.76□□□□□ -1.17
RSPO4Q2I0M5 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms