Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SEPHS1P4-201ENST00000446112 1176 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 HMGB1P7-201ENST00000450921 612 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC9.92□□□□□ -0.82
ATP7AQ04656 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 MTND6P16-201ENST00000504006 520 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC9.92□□□□□ -0.82
ATP7AQ04656 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 SNORA70D-201ENST00000578836 135 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 MIR3614-201ENST00000581261 86 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.92□□□□□ -0.82
ATP7AQ04656 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
ATP7AQ04656 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
ATP7AQ04656 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AC009108.3-201ENST00000602739 3515 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AC006141.1-201ENST00000581917 2170 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.92□□□□□ -0.82
ATP7AQ04656 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
ATP7AQ04656 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 RN7SL101P-201ENST00000496350 279 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC9.92□□□□□ -0.82
ATP7AQ04656 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC9.92□□□□□ -0.82
ATP7AQ04656 MIR6886-201ENST00000619864 61 ntBASIC9.92□□□□□ -0.82
ATP7AQ04656 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
ATP7AQ04656 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC9.91□□□□□ -0.82
ATP7AQ04656 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC9.91□□□□□ -0.82
ATP7AQ04656 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
ATP7AQ04656 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
ATP7AQ04656 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
ATP7AQ04656 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
ATP7AQ04656 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 AC104837.1-201ENST00000444644 1587 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 RPL31-202ENST00000409000 641 ntTSL 2 BASIC9.91□□□□□ -0.82
ATP7AQ04656 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 IPPKP1-201ENST00000422501 768 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 CHEK2P5-201ENST00000423877 246 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC9.91□□□□□ -0.82
ATP7AQ04656 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 RN7SL214P-201ENST00000487317 265 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 RNA5SP418-201ENST00000515951 117 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 NPIPB14P-203ENST00000532298 987 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
ATP7AQ04656 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
ATP7AQ04656 RN7SKP23-201ENST00000625159 4301 ntBASIC9.91□□□□□ -0.82
ATP7AQ04656 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC9.91□□□□□ -0.82
ATP7AQ04656 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
ATP7AQ04656 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
ATP7AQ04656 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
ATP7AQ04656 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC9.9□□□□□ -0.82
ATP7AQ04656 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9.9□□□□□ -0.82
ATP7AQ04656 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC9.9□□□□□ -0.82
ATP7AQ04656 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
ATP7AQ04656 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC9.9□□□□□ -0.82
ATP7AQ04656 MTND2P12-201ENST00000417560 1252 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 RPS3P2-201ENST00000421346 701 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 RPL5P34-201ENST00000426545 891 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC9.9□□□□□ -0.82
ATP7AQ04656 OR2L9P-201ENST00000444456 913 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC9.9□□□□□ -0.82
ATP7AQ04656 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC9.9□□□□□ -0.82
ATP7AQ04656 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC9.9□□□□□ -0.82
ATP7AQ04656 LINC00556-201ENST00000569603 412 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 AP005136.2-201ENST00000583253 1049 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 AP001264.1-201ENST00000620602 703 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
ATP7AQ04656 AC007406.5-201ENST00000570140 3170 ntBASIC9.9□□□□□ -0.82
ATP7AQ04656 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
ATP7AQ04656 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
ATP7AQ04656 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
ATP7AQ04656 HCG18-244ENST00000602516 2890 ntBASIC9.9□□□□□ -0.83
ATP7AQ04656 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
ATP7AQ04656 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC9.9□□□□□ -0.83
ATP7AQ04656 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
ATP7AQ04656 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms