Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CCNA1P78396 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 RN7SKP86-201ENST00000410454 332 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 RPL17P17-201ENST00000419491 557 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AL139158.1-201ENST00000424719 340 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 OR6R1P-201ENST00000431838 940 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 RPL5P10-201ENST00000445207 894 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.91□□□□□ -1.14
CCNA1P78396 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 RN7SL160P-201ENST00000468558 284 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 RPS27P20-201ENST00000492051 246 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.91□□□□□ -1.14
CCNA1P78396 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 AC093816.1-201ENST00000515076 913 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.91□□□□□ -1.14
CCNA1P78396 Vault.2-201ENST00000516519 98 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.91□□□□□ -1.14
CCNA1P78396 AC009955.2-201ENST00000597288 542 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 WBP1LP12-201ENST00000604449 331 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC011891.2-201ENST00000604949 397 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC139795.3-201ENST00000606358 541 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AC012676.3-201ENST00000614983 479 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.91□□□□□ -1.14
CCNA1P78396 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 AL683826.1-201ENST00000624104 627 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CCNA1P78396 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CCNA1P78396 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 AL512329.1-201ENST00000404600 1592 ntBASIC7.91□□□□□ -1.14
CCNA1P78396 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CCNA1P78396 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CCNA1P78396 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
CCNA1P78396 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CCNA1P78396 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
CCNA1P78396 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
CCNA1P78396 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CCNA1P78396 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CCNA1P78396 RNU1-65P-201ENST00000363919 148 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 RNA5SP232-201ENST00000364144 119 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.9□□□□□ -1.14
CCNA1P78396 AL645939.3-201ENST00000435408 225 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.9□□□□□ -1.14
CCNA1P78396 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.9□□□□□ -1.14
CCNA1P78396 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.9□□□□□ -1.14
CCNA1P78396 SNX18P23-201ENST00000510867 677 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 SAA3P-201ENST00000533267 365 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.9□□□□□ -1.14
CCNA1P78396 TDGP1-201ENST00000543961 1229 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 AC005519.1-201ENST00000554490 601 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.9□□□□□ -1.14
CCNA1P78396 AC025283.1-201ENST00000572039 734 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 RPL29P33-201ENST00000587474 316 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 AC012368.3-201ENST00000604190 219 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 CASC19-232ENST00000641480 1244 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 CASC19-274ENST00000642018 970 ntBASIC7.9□□□□□ -1.14
CCNA1P78396 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCNA1P78396 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CCNA1P78396 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
CCNA1P78396 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
CCNA1P78396 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.9□□□□□ -1.15
CCNA1P78396 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCNA1P78396 AL137918.1-201ENST00000624542 1922 ntBASIC7.9□□□□□ -1.15
CCNA1P78396 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
CCNA1P78396 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.89□□□□□ -1.15
CCNA1P78396 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.89□□□□□ -1.15
CCNA1P78396 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.89□□□□□ -1.15
CCNA1P78396 AC063923.1-201ENST00000478982 1619 ntBASIC7.89□□□□□ -1.15
CCNA1P78396 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.89□□□□□ -1.15
CCNA1P78396 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCNA1P78396 PRNCR1-201ENST00000635449 12727 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms