Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.24□□□□□ -1.09
RHBDL3P58872 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 NF1P8-201ENST00000415351 1461 ntBASIC8.24□□□□□ -1.09
RHBDL3P58872 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
RHBDL3P58872 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
RHBDL3P58872 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
RHBDL3P58872 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AL132656.3-201ENST00000606384 1595 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.23□□□□□ -1.09
RHBDL3P58872 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
RHBDL3P58872 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC8.23□□□□□ -1.09
RHBDL3P58872 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RHBDL3P58872 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 RN7SKP47-201ENST00000365347 328 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 CASKP1-201ENST00000412870 582 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC096632.2-201ENST00000438139 1239 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AL445991.1-201ENST00000450381 475 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AC099670.1-201ENST00000455141 783 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 OR7L1P-201ENST00000456181 380 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 RN7SL393P-201ENST00000463588 296 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC098818.1-201ENST00000478593 252 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC8.23□□□□□ -1.09
RHBDL3P58872 RN7SKP196-201ENST00000516267 345 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AC008676.3-201ENST00000521237 435 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC022784.5-201ENST00000522241 437 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC8.23□□□□□ -1.09
RHBDL3P58872 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.23□□□□□ -1.09
RHBDL3P58872 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC8.23□□□□□ -1.09
RHBDL3P58872 RPL29P33-201ENST00000587474 316 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC020914.7-201ENST00000594477 545 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AC018690.1-201ENST00000608144 626 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC006328.2-201ENST00000623198 397 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 AC012005.2-201ENST00000624333 397 ntBASIC8.23□□□□□ -1.09
RHBDL3P58872 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
RHBDL3P58872 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.23□□□□□ -1.09
RHBDL3P58872 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.23□□□□□ -1.09
RHBDL3P58872 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RHBDL3P58872 RNF19BPY-201ENST00000458209 1550 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.22□□□□□ -1.09
RHBDL3P58872 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 DLEU2L-201ENST00000371086 3555 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.22□□□□□ -1.09
RHBDL3P58872 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 RBBP4P4-201ENST00000398588 1289 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 RPL12P23-201ENST00000405880 490 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 AL033519.1-201ENST00000407266 307 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 RNA5SP155-201ENST00000411154 129 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 UBTFL2-201ENST00000411859 1191 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 DNAJA1P6-201ENST00000437347 354 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC099340.1-201ENST00000475247 599 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 RN7SL37P-201ENST00000490461 307 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.22□□□□□ -1.09
RHBDL3P58872 AP001000.1-201ENST00000526843 742 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
RHBDL3P58872 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
RHBDL3P58872 AC007068.2-201ENST00000543168 395 ntBASIC8.22□□□□□ -1.09
RHBDL3P58872 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms