Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SUMO3P55854 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SUMO3P55854 RNU6-1055P-201ENST00000391085 107 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC007068.1-201ENST00000396690 844 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 SUMO2P13-201ENST00000403109 272 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL355143.1-201ENST00000407101 841 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.58□□□□□ -1.36
SUMO3P55854 AL354692.1-201ENST00000423044 315 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 VDAC1P2-201ENST00000423609 850 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 GSTA6P-201ENST00000424144 582 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AL161626.1-201ENST00000441480 490 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC007000.2-201ENST00000442564 487 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 PCMTD1P3-201ENST00000451824 472 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 VN1R6P-201ENST00000458417 907 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC117395.2-201ENST00000463122 1128 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 CABYRP1-201ENST00000465493 1045 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 AC078857.1-201ENST00000469870 667 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC093663.2-201ENST00000484625 313 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 RN7SL797P-201ENST00000486314 297 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC092902.1-201ENST00000486999 259 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AP005202.1-201ENST00000489915 867 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.58□□□□□ -1.36
SUMO3P55854 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC010468.3-201ENST00000508225 458 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 DPPA3P2-202ENST00000557188 1219 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC093510.2-201ENST00000562820 896 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC106785.3-201ENST00000564064 847 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 MRPL45P2-203ENST00000573318 473 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
SUMO3P55854 RN7SL667P-201ENST00000582817 298 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 SNORD91A-202ENST00000609620 191 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AC016957.2-201ENST00000616998 848 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL596275.2-203ENST00000641951 371 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 AL157713.1-201ENST00000379752 1531 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SUMO3P55854 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SUMO3P55854 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC061975.5-201ENST00000584928 1441 ntBASIC6.58□□□□□ -1.36
SUMO3P55854 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.58□□□□□ -1.36
SUMO3P55854 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.58□□□□□ -1.36
SUMO3P55854 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.57□□□□□ -1.36
SUMO3P55854 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SUMO3P55854 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms