Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC6.21□□□□□ -1.42
SOX2P48431 AC108451.2-201ENST00000603875 538 ntBASIC6.21□□□□□ -1.42
SOX2P48431 AC011458.1-201ENST00000604034 617 ntBASIC6.21□□□□□ -1.42
SOX2P48431 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX2P48431 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 AC009032.1-201ENST00000617574 431 ntBASIC6.21□□□□□ -1.42
SOX2P48431 BX005195.1-201ENST00000618097 1198 ntBASIC6.21□□□□□ -1.42
SOX2P48431 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX2P48431 OR5G5P-204ENST00000627642 621 ntBASIC6.21□□□□□ -1.42
SOX2P48431 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX2P48431 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
SOX2P48431 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SOX2P48431 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 TPTE2P2-201ENST00000403471 1466 ntBASIC6.21□□□□□ -1.42
SOX2P48431 CYP2G2P-201ENST00000594920 1485 ntBASIC6.21□□□□□ -1.42
SOX2P48431 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX2P48431 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.21□□□□□ -1.42
SOX2P48431 DDX43P1-201ENST00000510713 1763 ntBASIC6.21□□□□□ -1.42
SOX2P48431 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.21□□□□□ -1.42
SOX2P48431 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX2P48431 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SOX2P48431 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SOX2P48431 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SOX2P48431 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 RPL10P16-201ENST00000325000 645 ntBASIC6.2□□□□□ -1.42
SOX2P48431 RNU6-386P-201ENST00000362650 107 ntBASIC6.2□□□□□ -1.42
SOX2P48431 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 OR6C72P-201ENST00000451403 892 ntBASIC6.2□□□□□ -1.42
SOX2P48431 RN7SL259P-201ENST00000478499 253 ntBASIC6.2□□□□□ -1.42
SOX2P48431 MTND3P24-201ENST00000506306 329 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX2P48431 LINC01085-203ENST00000511195 326 ntBASIC6.2□□□□□ -1.42
SOX2P48431 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX2P48431 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX2P48431 AP006587.2-201ENST00000530696 493 ntBASIC6.2□□□□□ -1.42
SOX2P48431 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.2□□□□□ -1.42
SOX2P48431 AC044860.3-201ENST00000559957 368 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.2□□□□□ -1.42
SOX2P48431 AC012181.2-201ENST00000570210 699 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC243312.1-201ENST00000570582 275 ntBASIC6.2□□□□□ -1.42
SOX2P48431 MRPS21P9-201ENST00000571150 257 ntBASIC6.2□□□□□ -1.42
SOX2P48431 MIR4793-201ENST00000577502 87 ntBASIC6.2□□□□□ -1.42
SOX2P48431 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 NPM1P45-201ENST00000583151 559 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.2□□□□□ -1.42
SOX2P48431 OR5AH1P-201ENST00000595968 283 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC139493.1-201ENST00000604368 397 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AL132821.1-201ENST00000616029 394 ntBASIC6.2□□□□□ -1.42
SOX2P48431 MIR6723-201ENST00000621981 89 ntBASIC6.2□□□□□ -1.42
SOX2P48431 AL353608.4-201ENST00000624487 1188 ntBASIC6.2□□□□□ -1.42
SOX2P48431 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SOX2P48431 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SOX2P48431 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.2□□□□□ -1.42
SOX2P48431 AL512283.1-201ENST00000606756 1384 ntBASIC6.19□□□□□ -1.42
SOX2P48431 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX2P48431 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.19□□□□□ -1.42
SOX2P48431 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX2P48431 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX2P48431 RNA5SP483-201ENST00000363431 118 ntBASIC6.19□□□□□ -1.42
SOX2P48431 HMGB1P39-201ENST00000366304 880 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms