Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
COL15A1P39059 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 LINC01613-201ENST00000561476 2780 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 PRELID1P1-201ENST00000403549 660 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 RN7SKP240-201ENST00000410583 375 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.68□□□□□ -1.02
COL15A1P39059 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 EIF5AP4-201ENST00000441206 465 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 DEFA11P-201ENST00000446470 261 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC002486.2-201ENST00000447806 590 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 AP002884.1-201ENST00000479691 655 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 AC026774.2-201ENST00000513990 1098 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 OR4A21P-201ENST00000532759 944 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
COL15A1P39059 AC026826.3-201ENST00000561747 158 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC023827.2-201ENST00000566880 1061 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AP001542.1-201ENST00000591314 200 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AL589765.6-201ENST00000601909 549 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.68□□□□□ -1.02
COL15A1P39059 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 CASC19-212ENST00000641153 1287 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 AC104837.1-201ENST00000444644 1587 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 MFSD8-217ENST00000641178 4374 ntBASIC8.68□□□□□ -1.02
COL15A1P39059 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.68□□□□□ -1.02
COL15A1P39059 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
COL15A1P39059 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL15A1P39059 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
COL15A1P39059 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
COL15A1P39059 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.67□□□□□ -1.02
COL15A1P39059 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 RNA5SP115-201ENST00000411160 107 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.67□□□□□ -1.02
COL15A1P39059 GAPDHP57-201ENST00000424400 585 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 KCTD9P1-201ENST00000430462 1167 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.67□□□□□ -1.02
COL15A1P39059 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC8.67□□□□□ -1.02
COL15A1P39059 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.67□□□□□ -1.02
COL15A1P39059 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.67□□□□□ -1.02
COL15A1P39059 AC135721.2-201ENST00000464237 300 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.67□□□□□ -1.02
COL15A1P39059 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.67□□□□□ -1.02
COL15A1P39059 RPS27P20-201ENST00000492051 246 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 AC113367.2-201ENST00000505749 160 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.67□□□□□ -1.02
COL15A1P39059 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 DYNLL1P1-201ENST00000595442 269 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 MIR6861-201ENST00000618657 64 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 AC010325.3-201ENST00000641084 394 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 AL354702.2-202ENST00000641481 890 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
COL15A1P39059 API5P1-201ENST00000424316 1510 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 DDX43P1-201ENST00000510713 1763 ntBASIC8.67□□□□□ -1.02
COL15A1P39059 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL15A1P39059 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.67□□□□□ -1.02
COL15A1P39059 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
COL15A1P39059 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
COL15A1P39059 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
COL15A1P39059 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL15A1P39059 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.66□□□□□ -1.02
COL15A1P39059 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.66□□□□□ -1.02
COL15A1P39059 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms