Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 RN7SKP221-201ENST00000410420 301 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 RPS10P21-201ENST00000430654 475 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 FTH1P20-201ENST00000434913 548 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GAPDHP20-201ENST00000444107 1007 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 RN7SL143P-201ENST00000496780 297 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 TRAV11-201ENST00000539512 339 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 AC010327.2-201ENST00000587647 488 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.14□□□□□ -1.11
HLA-DOAP06340 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.14□□□□□ -1.11
HLA-DOAP06340 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 FANCD2P2-201ENST00000437591 1400 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 RNA5SP308-201ENST00000362532 115 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC099535.1-201ENST00000408928 371 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 GAPDHP57-201ENST00000424400 585 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AL590128.1-201ENST00000433407 286 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC099670.1-201ENST00000455141 783 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC096743.1-201ENST00000485172 319 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 RPS4XP23-201ENST00000487801 237 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC015524.1-201ENST00000491585 472 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC026774.2-201ENST00000513990 1098 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 EEF1B2P2-201ENST00000519625 676 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 TMF1P1-201ENST00000576058 373 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 MIR212-201ENST00000586026 110 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AC068213.1-201ENST00000625124 226 ntBASIC8.13□□□□□ -1.11
HLA-DOAP06340 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
HLA-DOAP06340 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
HLA-DOAP06340 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC010132.4-201ENST00000569883 1368 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AL451064.2-201ENST00000623514 1654 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
HLA-DOAP06340 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 UBBP1-201ENST00000392399 473 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 RN7SKP38-201ENST00000410782 309 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 VN1R53P-201ENST00000429536 957 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 SNRPBP1-201ENST00000443634 282 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AL157385.1-201ENST00000446973 268 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AL359839.1-201ENST00000451975 1160 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 MEF2AP1-201ENST00000454867 863 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC135721.2-201ENST00000464237 300 ntBASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.12□□□□□ -1.11
HLA-DOAP06340 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms