Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC084880.1-201ENST00000392530 545 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC007068.1-201ENST00000396690 844 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 RPL7P27-201ENST00000403775 720 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC009319.1-201ENST00000411493 754 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC098592.1-201ENST00000419352 333 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 RPL23AP85-201ENST00000421838 433 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 IPPKP1-201ENST00000422501 768 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC244034.1-201ENST00000428027 792 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 PIGCP2-201ENST00000433617 835 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 OR5M13P-201ENST00000433944 937 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 RAB28P3-201ENST00000448325 597 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AL390026.1-201ENST00000456647 457 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC004924.1-201ENST00000480160 781 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC106774.1-201ENST00000515105 321 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 NDUFS5P6-201ENST00000529136 295 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 OR8I1P-201ENST00000529291 931 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC037479.1-201ENST00000558361 625 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC024270.1-201ENST00000559181 404 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 NUTF2P6-201ENST00000560892 385 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 RBM22P1-201ENST00000578589 1214 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC005034.4-201ENST00000603612 899 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC013476.2-201ENST00000614456 459 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AC090517.2-201ENST00000614966 680 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 Y_RNA.804-201ENST00000615262 101 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 SAMMSON-209ENST00000641222 1100 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 Z83820.1-201ENST00000456978 1499 ntBASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CUEDC1Q9NWM3 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 LRRC37A15P-201ENST00000514785 1355 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 ADIPOQ-AS1-201ENST00000422718 3443 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 MIR1296-201ENST00000408136 92 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 RNA5SP221-201ENST00000411271 103 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 RPS7P9-201ENST00000414704 586 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 MTATP6P27-201ENST00000416987 621 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC116050.1-206ENST00000423774 213 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 AL772284.1-201ENST00000443421 905 ntBASIC8.24□□□□□ -1.09
CUEDC1Q9NWM3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms