Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RNA5SP472-201ENST00000363868 119 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF37CP-201ENST00000406795 241 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 SNORA81.1-201ENST00000458922 177 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL870P-201ENST00000460111 296 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL149P-201ENST00000465197 281 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 CBX5P1-201ENST00000468470 561 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL569P-201ENST00000494652 288 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AP001646.2-201ENST00000528645 1156 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC078878.1-201ENST00000539832 958 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MTCYBP27-201ENST00000555160 670 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MTND3P12-201ENST00000559068 328 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL131P-201ENST00000579043 256 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC009955.2-201ENST00000597288 542 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC137695.2-201ENST00000603123 754 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AC006453.3-201ENST00000635891 377 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MFSD8-213ENST00000641134 1327 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 UG0898H09-202ENST00000623646 7040 ntBASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP1Q96SZ6 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 EPS15P1-202ENST00000459691 2071 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC104162.1-201ENST00000430831 2382 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 U3.48-201ENST00000363172 216 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 MEAF6P1-201ENST00000416092 327 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 GAPDHP69-201ENST00000425504 1008 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 PUDPP2-201ENST00000431423 643 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 TPTE2P3-201ENST00000441562 1189 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 DCAF13P2-201ENST00000514188 555 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC100854.1-201ENST00000520351 341 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC107952.1-201ENST00000524200 376 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AP001372.4-201ENST00000524889 472 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 CASP1P2-201ENST00000526830 1258 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC079866.1-201ENST00000534985 1220 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC026458.1-201ENST00000564330 438 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC093283.1-201ENST00000565306 1075 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 OR1AB1P-201ENST00000585564 761 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AL391834.1-201ENST00000609609 560 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AP005329.3-201ENST00000609924 686 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 AL391262.1-201ENST00000556558 1992 ntBASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP1Q96SZ6 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms