Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL390882.1-201ENST00000618821 594 ntBASIC9.6□□□□□ -0.87
CPS1P31327 Six3os1_1.1-201ENST00000620900 87 ntBASIC9.6□□□□□ -0.87
CPS1P31327 TEX41-255ENST00000626404 610 ntTSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 MAPK10-379ENST00000642013 1385 ntBASIC9.6□□□□□ -0.87
CPS1P31327 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CPS1P31327 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC9.6□□□□□ -0.87
CPS1P31327 AC107398.3-201ENST00000562284 7000 ntBASIC9.6□□□□□ -0.87
CPS1P31327 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CPS1P31327 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CPS1P31327 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.6□□□□□ -0.87
CPS1P31327 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC9.6□□□□□ -0.87
CPS1P31327 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC9.6□□□□□ -0.87
CPS1P31327 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC9.59□□□□□ -0.87
CPS1P31327 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 SNORA70.3-201ENST00000365075 132 ntBASIC9.59□□□□□ -0.87
CPS1P31327 AL139805.1-201ENST00000407837 289 ntBASIC9.59□□□□□ -0.87
CPS1P31327 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC9.59□□□□□ -0.87
CPS1P31327 PPIAP27-201ENST00000453800 265 ntBASIC9.59□□□□□ -0.87
CPS1P31327 RN7SL187P-201ENST00000495587 303 ntBASIC9.59□□□□□ -0.87
CPS1P31327 AC091849.1-201ENST00000509920 121 ntBASIC9.59□□□□□ -0.87
CPS1P31327 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 OTX2-203ENST00000554559 715 ntTSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC9.59□□□□□ -0.87
CPS1P31327 MIR3135A-201ENST00000578460 77 ntBASIC9.59□□□□□ -0.87
CPS1P31327 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC9.59□□□□□ -0.87
CPS1P31327 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
CPS1P31327 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC9.59□□□□□ -0.87
CPS1P31327 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC9.59□□□□□ -0.87
CPS1P31327 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CPS1P31327 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.59□□□□□ -0.87
CPS1P31327 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.88
CPS1P31327 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
CPS1P31327 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 RNA5SP474-201ENST00000391234 90 ntBASIC9.58□□□□□ -0.88
CPS1P31327 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC9.58□□□□□ -0.88
CPS1P31327 RN7SKP108-201ENST00000411367 328 ntBASIC9.58□□□□□ -0.88
CPS1P31327 IGKV1OR2-3-201ENST00000411475 288 ntBASIC9.58□□□□□ -0.88
CPS1P31327 GAPDHP57-201ENST00000424400 585 ntBASIC9.58□□□□□ -0.88
CPS1P31327 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC9.58□□□□□ -0.88
CPS1P31327 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 AL390198.2-201ENST00000510553 222 ntBASIC9.58□□□□□ -0.88
CPS1P31327 SNX18P23-201ENST00000510867 677 ntBASIC9.58□□□□□ -0.88
CPS1P31327 SNORD46.2-201ENST00000516021 102 ntBASIC9.58□□□□□ -0.88
CPS1P31327 RN7SKP35-201ENST00000517210 151 ntBASIC9.58□□□□□ -0.88
CPS1P31327 NPIPB14P-203ENST00000532298 987 ntBASIC9.58□□□□□ -0.88
CPS1P31327 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 AL589863.1-201ENST00000595383 631 ntBASIC9.58□□□□□ -0.88
CPS1P31327 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC9.58□□□□□ -0.88
CPS1P31327 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 OR7E122P-202ENST00000641144 6171 ntBASIC9.58□□□□□ -0.88
CPS1P31327 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 AC105046.1-201ENST00000566457 4997 ntBASIC9.58□□□□□ -0.88
CPS1P31327 CDY7P-201ENST00000429883 1604 ntBASIC9.58□□□□□ -0.88
CPS1P31327 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
CPS1P31327 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC9.58□□□□□ -0.88
CPS1P31327 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CPS1P31327 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
CPS1P31327 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
CPS1P31327 MRPS6P2-201ENST00000381143 370 ntBASIC9.57□□□□□ -0.88
CPS1P31327 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC9.57□□□□□ -0.88
CPS1P31327 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC9.57□□□□□ -0.88
CPS1P31327 PFN2-217ENST00000498307 556 ntTSL 4 BASIC9.57□□□□□ -0.88
CPS1P31327 AC018645.1-201ENST00000505003 109 ntBASIC9.57□□□□□ -0.88
CPS1P31327 AC007225.2-201ENST00000562529 256 ntBASIC9.57□□□□□ -0.88
CPS1P31327 CTSLP2-201ENST00000580501 394 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms