Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 OR4C1P-202ENST00000641065 1569 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 RN7SKP275-201ENST00000364626 301 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 U3.52-201ENST00000384034 216 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A1P20908 AL034399.1-201ENST00000451535 380 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 H3F3AP5-201ENST00000475267 429 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC008945.1-201ENST00000505144 499 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 RPL41P2-201ENST00000544920 409 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 NPM1P45-201ENST00000583151 559 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 MIR6886-201ENST00000619864 61 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AL512356.3-201ENST00000623005 461 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC006328.2-201ENST00000623198 397 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC012005.2-201ENST00000624333 397 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.55□□□□□ -1.36
COL5A1P20908 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 AP003972.1-201ENST00000625192 5446 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC6.55□□□□□ -1.36
COL5A1P20908 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 AL451064.2-201ENST00000623514 1654 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 PPIAP24-201ENST00000328558 471 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 SNORA70.3-201ENST00000365075 132 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 RNA5SP279-201ENST00000365513 117 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL5A1P20908 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 PSMA6P1-201ENST00000400275 741 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.55□□□□□ -1.36
COL5A1P20908 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A1P20908 SNRPBP1-201ENST00000443634 282 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC096743.1-201ENST00000485172 319 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 SLC25A14P1-201ENST00000502867 901 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL5A1P20908 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A1P20908 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
COL5A1P20908 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.55□□□□□ -1.36
COL5A1P20908 AC010463.3-201ENST00000594077 500 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 AC079315.1-201ENST00000602952 623 ntBASIC6.55□□□□□ -1.36
COL5A1P20908 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL5A1P20908 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A1P20908 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A1P20908 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 MAPK10-379ENST00000642013 1385 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A1P20908 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.54□□□□□ -1.36
COL5A1P20908 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 AL360013.1-201ENST00000419031 858 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 SETP20-201ENST00000457046 852 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.54□□□□□ -1.36
COL5A1P20908 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.54□□□□□ -1.36
COL5A1P20908 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 SNORA26.10-201ENST00000516427 141 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.54□□□□□ -1.36
COL5A1P20908 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 AL589743.6-201ENST00000611025 117 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 AC018659.2-201ENST00000624690 715 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
COL5A1P20908 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL5A1P20908 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
COL5A1P20908 AF131215.2-201ENST00000531549 1710 ntBASIC6.54□□□□□ -1.36
COL5A1P20908 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL5A1P20908 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms