Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.74□□□□□ -1.01
ERCC3P19447 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 AC078880.4-201ENST00000617627 1749 ntBASIC8.74□□□□□ -1.01
ERCC3P19447 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
ERCC3P19447 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
ERCC3P19447 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC008555.1-201ENST00000561778 2757 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 ARMCX7P-201ENST00000372828 562 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 GSTA12P-201ENST00000402398 508 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 OR52N3P-201ENST00000413417 934 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 OR51A6P-201ENST00000418680 1004 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 RPL35P8-201ENST00000433284 337 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 YAP1P2-201ENST00000455104 610 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 RPSAP37-201ENST00000470913 821 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC008410.1-201ENST00000483777 339 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC108688.1-201ENST00000485817 713 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 SNX18P25-201ENST00000510539 758 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC095059.2-201ENST00000510601 933 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC121161.1-201ENST00000510606 652 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.73□□□□□ -1.01
ERCC3P19447 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.73□□□□□ -1.01
ERCC3P19447 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.73□□□□□ -1.01
ERCC3P19447 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.73□□□□□ -1.01
ERCC3P19447 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 BNIP3P38-201ENST00000601117 544 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 MTCO3P22-201ENST00000603219 784 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC243830.2-201ENST00000618067 630 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC007275.1-201ENST00000621243 671 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC117503.3-201ENST00000623811 601 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AP003108.4-201ENST00000623917 878 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 AC129908.1-201ENST00000624553 648 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 FRG1DP-201ENST00000635586 771 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 MAPK10-290ENST00000641237 2826 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 CCAT2-201ENST00000630920 1752 ntBASIC8.73□□□□□ -1.01
ERCC3P19447 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
ERCC3P19447 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.73□□□□□ -1.01
ERCC3P19447 HSPD1P14-201ENST00000432666 1618 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 AC009166.2-201ENST00000624410 2833 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
ERCC3P19447 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
ERCC3P19447 SNORA73B-201ENST00000363217 204 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.72□□□□□ -1.01
ERCC3P19447 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.72□□□□□ -1.01
ERCC3P19447 AL606495.1-201ENST00000422100 813 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 FTH1P20-201ENST00000434913 548 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ERCC3P19447 GTF2F2P2-201ENST00000445825 721 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 AL157884.3-201ENST00000448273 1184 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.72□□□□□ -1.01
ERCC3P19447 ZNF736P8Y-201ENST00000451913 669 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 RPL23AP23-201ENST00000452590 471 ntBASIC8.72□□□□□ -1.01
ERCC3P19447 TREML3P-201ENST00000457327 501 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms