Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 WBP1LP11-201ENST00000586141 328 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 NDUFB9P1-201ENST00000604683 510 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 AC019257.2-201ENST00000605539 497 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 AL035425.4-201ENST00000624509 1063 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 AC183089.2-201ENST00000637931 916 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 RACGAP1P-201ENST00000550663 1879 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 OR56A4-201ENST00000330728 1209 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 AC107977.1-201ENST00000355745 939 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 RN7SKP250-201ENST00000363924 321 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 RN7SKP171-201ENST00000364417 303 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGA1P17096 AL359694.1-201ENST00000403247 604 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 RN7SKP221-201ENST00000410420 301 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGA1P17096 OR6R1P-201ENST00000431838 940 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGA1P17096 ARMC4P1-201ENST00000438905 707 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 COL11A2P1-205ENST00000441798 676 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 AC245291.3-201ENST00000443400 292 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGA1P17096 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.07□□□□□ -1.28
HMGA1P17096 RPL7AP23-201ENST00000482625 776 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 RPL29P23-201ENST00000486188 442 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.07□□□□□ -1.28
HMGA1P17096 PABPC1P1-201ENST00000506347 591 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 OR52H2P-201ENST00000514607 902 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 AC024405.1-201ENST00000532521 1042 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.07□□□□□ -1.28
HMGA1P17096 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.07□□□□□ -1.28
HMGA1P17096 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 ANP32BP1-202ENST00000568553 737 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
HMGA1P17096 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.07□□□□□ -1.28
HMGA1P17096 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 CASC19-205ENST00000641013 1411 ntBASIC7.07□□□□□ -1.28
HMGA1P17096 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HMGA1P17096 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HMGA1P17096 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 AC096992.2-201ENST00000609553 1684 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
HMGA1P17096 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 PSMC1P6-201ENST00000477233 1319 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HMGA1P17096 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 IPO7P2-201ENST00000451446 1750 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 RPL12P13-201ENST00000310055 497 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 PPIAP24-201ENST00000328558 471 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HMGA1P17096 MIR199B-201ENST00000384849 110 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.06□□□□□ -1.28
HMGA1P17096 RN7SKP271-201ENST00000410528 320 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.06□□□□□ -1.28
HMGA1P17096 THEM7P-201ENST00000419556 672 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGA1P17096 RPL24P2-201ENST00000421023 475 ntBASIC7.06□□□□□ -1.28
HMGA1P17096 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.06□□□□□ -1.28
HMGA1P17096 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms