Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 RN7SKP47-201ENST00000365347 328 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 CLNS1AP1-201ENST00000435954 682 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC020914.7-201ENST00000594477 545 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 AL034374.2-201ENST00000605281 548 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC004908.1-201ENST00000606572 541 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 AL118556.2-201ENST00000614375 824 ntBASIC8.16□□□□□ -1.1
HLA-DOAP06340 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HLA-DOAP06340 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.16□□□□□ -1.1
HLA-DOAP06340 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC087501.5-201ENST00000607496 2374 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 OR4C1P-202ENST00000641065 1569 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 NF1P8-201ENST00000415351 1461 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC121334.1-201ENST00000396414 802 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 FDPSP5-201ENST00000399474 1057 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 GAPDHP19-201ENST00000431768 1005 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 TPTE2P1-204ENST00000435256 593 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 HMGN1P6-201ENST00000438508 291 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 SNX18P23-201ENST00000510867 677 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC138517.1-201ENST00000515724 568 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 RN7SKP196-201ENST00000516267 345 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 AL109620.1-201ENST00000618738 1197 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 AC005514.1-201ENST00000623521 208 ntBASIC8.15□□□□□ -1.1
HLA-DOAP06340 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.15□□□□□ -1.1
HLA-DOAP06340 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HLA-DOAP06340 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-DOAP06340 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
HLA-DOAP06340 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
HLA-DOAP06340 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.15□□□□□ -1.11
HLA-DOAP06340 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-DOAP06340 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
HLA-DOAP06340 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
HLA-DOAP06340 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms