Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC139792.1-201ENST00000607051 647 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.32□□□□□ -1.24
APOEP02649 AC004943.1-203ENST00000624370 1074 ntBASIC7.32□□□□□ -1.24
APOEP02649 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.32□□□□□ -1.24
APOEP02649 TMEM14EP-202ENST00000639378 1296 ntBASIC7.32□□□□□ -1.24
APOEP02649 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
APOEP02649 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
APOEP02649 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
APOEP02649 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.32□□□□□ -1.24
APOEP02649 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
APOEP02649 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
APOEP02649 AL359263.1-201ENST00000441188 2796 ntBASIC7.31□□□□□ -1.24
APOEP02649 KYNUP2-201ENST00000582280 1329 ntBASIC7.31□□□□□ -1.24
APOEP02649 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.31□□□□□ -1.24
APOEP02649 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
APOEP02649 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
APOEP02649 RNA5SP172-201ENST00000365061 118 ntBASIC7.31□□□□□ -1.24
APOEP02649 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC7.31□□□□□ -1.24
APOEP02649 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
APOEP02649 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 PDCL3P5-201ENST00000398028 722 ntBASIC7.31□□□□□ -1.24
APOEP02649 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 RN7SKP268-201ENST00000411107 316 ntBASIC7.31□□□□□ -1.24
APOEP02649 PUDPP2-201ENST00000431423 643 ntBASIC7.31□□□□□ -1.24
APOEP02649 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 AC009518.3-201ENST00000438972 253 ntBASIC7.31□□□□□ -1.24
APOEP02649 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.31□□□□□ -1.24
APOEP02649 MED28P7-201ENST00000456611 530 ntBASIC7.31□□□□□ -1.24
APOEP02649 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.31□□□□□ -1.24
APOEP02649 RPS10P20-201ENST00000494130 463 ntBASIC7.31□□□□□ -1.24
APOEP02649 RPL10P7-201ENST00000495649 625 ntBASIC7.31□□□□□ -1.24
APOEP02649 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 ULK4P1-202ENST00000565174 503 ntBASIC7.31□□□□□ -1.24
APOEP02649 CCDC58P1-201ENST00000578567 430 ntBASIC7.31□□□□□ -1.24
APOEP02649 IGLJCOR18-201ENST00000584002 424 ntBASIC7.31□□□□□ -1.24
APOEP02649 AL078624.2-201ENST00000605063 554 ntBASIC7.31□□□□□ -1.24
APOEP02649 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.31□□□□□ -1.24
APOEP02649 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.31□□□□□ -1.24
APOEP02649 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
APOEP02649 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.31□□□□□ -1.24
APOEP02649 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 AL133243.4-201ENST00000623116 3109 ntBASIC7.3□□□□□ -1.24
APOEP02649 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 MEAF6P1-201ENST00000416092 327 ntBASIC7.3□□□□□ -1.24
APOEP02649 CHCHD3P1-201ENST00000425516 676 ntBASIC7.3□□□□□ -1.24
APOEP02649 BX005266.3-201ENST00000443013 1075 ntBASIC7.3□□□□□ -1.24
APOEP02649 SCDP1-201ENST00000455244 1081 ntBASIC7.3□□□□□ -1.24
APOEP02649 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.3□□□□□ -1.24
APOEP02649 AC079193.1-201ENST00000460497 588 ntBASIC7.3□□□□□ -1.24
APOEP02649 RPL34P34-201ENST00000465389 354 ntBASIC7.3□□□□□ -1.24
APOEP02649 RPS16P9-201ENST00000477220 427 ntBASIC7.3□□□□□ -1.24
APOEP02649 RN7SL849P-201ENST00000485236 295 ntBASIC7.3□□□□□ -1.24
APOEP02649 AC114940.1-201ENST00000512162 1265 ntBASIC7.3□□□□□ -1.24
APOEP02649 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.3□□□□□ -1.24
APOEP02649 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 SSU72P6-201ENST00000532644 488 ntBASIC7.3□□□□□ -1.24
APOEP02649 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.3□□□□□ -1.24
APOEP02649 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.3□□□□□ -1.24
APOEP02649 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.3□□□□□ -1.24
APOEP02649 AC079414.3-201ENST00000612986 1090 ntBASIC7.3□□□□□ -1.24
APOEP02649 AC245407.2-201ENST00000614199 451 ntBASIC7.3□□□□□ -1.24
APOEP02649 AC008626.2-201ENST00000624425 248 ntBASIC7.3□□□□□ -1.24
APOEP02649 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 AL121949.2-201ENST00000403446 1548 ntBASIC7.3□□□□□ -1.24
APOEP02649 CASC19-243ENST00000641588 1546 ntBASIC7.3□□□□□ -1.24
APOEP02649 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
APOEP02649 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.3□□□□□ -1.24
APOEP02649 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
APOEP02649 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.3□□□□□ -1.24
APOEP02649 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms