Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RAB30-209ENST00000532548 644 ntTSL 3 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 BLZF2P-201ENST00000553776 1130 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC087477.5-201ENST00000558246 562 ntTSL 3 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 DNM1P33-201ENST00000565222 270 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 OR7A11P-201ENST00000597719 953 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC011374.2-201ENST00000607135 526 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 HTR1DP1-201ENST00000616500 888 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC007347.2-201ENST00000623044 180 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC112204.3-201ENST00000623822 332 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SMG1P1-202ENST00000309865 4223 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 RP1-206ENST00000636932 3649 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 ATP8A2P3-201ENST00000426792 1536 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 TRIM51EP-201ENST00000524374 1516 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC006042.3-201ENST00000454684 1469 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 PACRG-AS2-201ENST00000418665 1300 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 EIF3EP1-201ENST00000433978 1316 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 Y_RNA.61-201ENST00000362835 102 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 Y_RNA.70-201ENST00000362886 110 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 RNU6-553P-201ENST00000364047 96 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 BECN1P2-201ENST00000407947 812 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 RPL23AP18-201ENST00000416139 468 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 CENPIP1-201ENST00000425713 902 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC241584.1-201ENST00000438469 1241 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC027124.1-201ENST00000440852 466 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AL589880.1-201ENST00000448271 287 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 FGF7P6-202ENST00000451282 293 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 MRPL35P4-201ENST00000453682 566 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 YRDCP3-201ENST00000456507 480 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC026782.2-201ENST00000510845 636 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 RN7SKP34-201ENST00000516142 244 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC104383.1-201ENST00000530297 370 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALDH1A1P00352 ERP27-202ENST00000540097 993 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC090616.5-202ENST00000582111 297 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC090616.1-201ENST00000583895 447 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 MIR6813-201ENST00000621638 56 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC016717.3-201ENST00000624730 554 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 AC099654.5-201ENST00000636479 350 ntBASIC9.16□□□□□ -0.94
ALDH1A1P00352 RPE-201ENST00000354506 3165 ntTSL 2 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms