Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KRT8P20-201ENST00000423953 1409 ntBASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 AL031963.3-201ENST00000606441 850 ntBASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 AC026471.5-201ENST00000615068 467 ntBASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1G3Q9Y6M4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 AL355075.4-201ENST00000554988 638 ntBASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.53■□□□□ 0.72
CSNK1G3Q9Y6M4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 AL355355.2-201ENST00000442321 338 ntBASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 AC073195.1-201ENST00000607241 877 ntBASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.52■□□□□ 0.72
CSNK1G3Q9Y6M4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSNK1G3Q9Y6M4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSNK1G3Q9Y6M4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CSNK1G3Q9Y6M4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CSNK1G3Q9Y6M4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 AC087499.1-201ENST00000418141 1075 ntBASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 CD177P1-201ENST00000606252 935 ntBASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 AL353708.3-201ENST00000610272 989 ntBASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.51■□□□□ 0.71
CSNK1G3Q9Y6M4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 TSPY15P-201ENST00000457163 923 ntBASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 AP003071.4-201ENST00000562276 1284 ntBASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms