Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCN10AQ9Y5Y9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 AC116351.2-201ENST00000606540 1585 ntBASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 B3GAT3P1-201ENST00000471720 806 ntBASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 AC005363.2-201ENST00000618631 242 ntBASIC21.98■■□□□ 1.11
SCN10AQ9Y5Y9 FSCN1P1-201ENST00000568912 1481 ntBASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 AP006587.1-201ENST00000534129 1502 ntBASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 AF106564.1-201ENST00000607058 2553 ntBASIC21.97■■□□□ 1.11
SCN10AQ9Y5Y9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 AC011506.1-201ENST00000474329 610 ntBASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 TFP1-202ENST00000475455 1573 ntBASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 AC006128.1-201ENST00000624704 1661 ntBASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCN10AQ9Y5Y9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SCN10AQ9Y5Y9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SCN10AQ9Y5Y9 AC018553.1-201ENST00000616682 1458 ntBASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCN10AQ9Y5Y9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 AP005242.2-201ENST00000580065 1175 ntBASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 DUX4L26-201ENST00000489078 1255 ntBASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 KRT18P16-201ENST00000510337 1294 ntBASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 DPP3P2-201ENST00000416030 1696 ntBASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 FP700111.2-201ENST00000619190 1892 ntBASIC21.94■■□□□ 1.1
SCN10AQ9Y5Y9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SCN10AQ9Y5Y9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms