Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SOX15-203ENST00000570788 1093 ntBASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
RAI2Q9Y5P3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 UNC93B4-201ENST00000505679 747 ntBASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.17■□□□□ 0.82
RAI2Q9Y5P3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 KRT16P6-202ENST00000425692 1426 ntBASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAI2Q9Y5P3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RAI2Q9Y5P3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI2Q9Y5P3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAI2Q9Y5P3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAI2Q9Y5P3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.13■□□□□ 0.81
RAI2Q9Y5P3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.13■□□□□ 0.81
RAI2Q9Y5P3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms