Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TCF3P1-201ENST00000423021 1937 ntBASIC18.61■□□□□ 0.57
CLDN16Q9Y5I7 AC112907.3-201ENST00000577781 2400 ntBASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 KRT18P29-201ENST00000397031 1267 ntBASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 AL121829.2-201ENST00000620908 328 ntBASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN16Q9Y5I7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 AC116351.2-201ENST00000606540 1585 ntBASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN16Q9Y5I7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN16Q9Y5I7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN16Q9Y5I7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN16Q9Y5I7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN16Q9Y5I7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 PHGDH-210ENST00000641115 1638 ntBASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN16Q9Y5I7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 TFP1-202ENST00000475455 1573 ntBASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 GCSHP5-201ENST00000443090 522 ntBASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 AC018553.1-201ENST00000616682 1458 ntBASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN16Q9Y5I7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms