Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 AC099778.1-201ENST00000568593 1911 ntBASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB1Q9Y5F3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB1Q9Y5F3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 MIR718-201ENST00000390190 70 ntBASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 PNMA6B-201ENST00000538162 1200 ntBASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB1Q9Y5F3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 AC233263.1-201ENST00000578059 224 ntBASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 MIR4497-201ENST00000583208 89 ntBASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHB1Q9Y5F3 AC092368.3-202ENST00000574180 1591 ntBASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHB1Q9Y5F3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms