Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 KRT17P2-201ENST00000300992 1314 ntBASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB9Q9Y5E1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 SOX15-203ENST00000570788 1093 ntBASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 AL512408.1-201ENST00000569378 2000 ntBASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB9Q9Y5E1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 AC005829.2-201ENST00000571422 1056 ntBASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 AC069544.1-201ENST00000609399 999 ntBASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB9Q9Y5E1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 AL390719.1-204ENST00000412397 1219 ntBASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB9Q9Y5E1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 KRT8P20-201ENST00000423953 1409 ntBASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB9Q9Y5E1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms