Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
CHTOPQ9Y3Y2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.29□□□□□ -0.12
CHTOPQ9Y3Y2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.29□□□□□ -0.12
CHTOPQ9Y3Y2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 AC241377.3-202ENST00000626088 1088 ntBASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 AC241585.3-202ENST00000628937 1088 ntBASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 AC245100.8-202ENST00000629247 1058 ntBASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 AL596257.1-201ENST00000641463 2694 ntBASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CHTOPQ9Y3Y2 TCAF2P1-201ENST00000291129 2421 ntBASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CHTOPQ9Y3Y2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 MIR4508-201ENST00000584178 70 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 pRNA.6-201ENST00000610482 90 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 pRNA.5-201ENST00000612139 90 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 pRNA.11-201ENST00000618423 90 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 pRNA.13-201ENST00000619112 90 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 AC011484.1-201ENST00000377652 1995 ntBASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CHTOPQ9Y3Y2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 AC093484.2-201ENST00000580996 2166 ntBASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHTOPQ9Y3Y2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms