Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 IKBKGP1-201ENST00000612193 1073 ntBASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
R3HCC1Q9Y3T6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 BID-214ENST00000617586 542 ntTSL 5 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.68■■□□□ 1.22
R3HCC1Q9Y3T6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 AC004911.1-201ENST00000416316 871 ntBASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 UBE2DNL-204ENST00000602536 740 ntBASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
R3HCC1Q9Y3T6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 AC006015.1-201ENST00000429970 570 ntBASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
R3HCC1Q9Y3T6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 AC093503.3-201ENST00000624917 2352 ntBASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3HCC1Q9Y3T6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
R3HCC1Q9Y3T6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
R3HCC1Q9Y3T6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 MYCNOS-205ENST00000641950 531 ntBASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 KRT16P2-201ENST00000414673 1423 ntBASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3HCC1Q9Y3T6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms