Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 AC005332.7-201ENST00000614046 2005 ntBASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRPS28Q9Y2Q9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 CYP21A1P-202ENST00000354927 1481 ntBASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 AC098818.2-201ENST00000564925 2320 ntBASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 AL591742.1-201ENST00000604433 565 ntBASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 AC120498.9-201ENST00000339021 3867 ntBASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.12■□□□□ 0.33
MRPS28Q9Y2Q9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 AC093484.2-201ENST00000580996 2166 ntBASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.11■□□□□ 0.33
MRPS28Q9Y2Q9 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 AL020996.1-203ENST00000536896 2307 ntBASIC17.1■□□□□ 0.33
MRPS28Q9Y2Q9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms