Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPH3AQ9Y2J0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 SMG8-203ENST00000578922 2178 ntBASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AL390719.1-204ENST00000412397 1219 ntBASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPH3AQ9Y2J0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 AP003097.1-201ENST00000530657 1135 ntBASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.22■□□□□ 0.51
RPH3AQ9Y2J0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 AC098590.1-201ENST00000468126 897 ntBASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 AC005829.2-201ENST00000571422 1056 ntBASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RPH3AQ9Y2J0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RPH3AQ9Y2J0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPH3AQ9Y2J0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms