Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1Q9Y2A7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.02■□□□□ 0.79
NCKAP1Q9Y2A7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1Q9Y2A7 PTBP1P-201ENST00000554374 1601 ntBASIC20.02■□□□□ 0.79
NCKAP1Q9Y2A7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 AC211429.1-201ENST00000415277 523 ntBASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 ECEL1P3-201ENST00000427961 737 ntBASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 AF186192.3-201ENST00000583427 947 ntBASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1Q9Y2A7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 AL121603.2-201ENST00000557373 2117 ntBASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 SAPCD2P4-201ENST00000424595 1171 ntBASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 AL355355.2-201ENST00000442321 338 ntBASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 LINC01023-201ENST00000606054 436 ntBASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 AC006128.1-201ENST00000624704 1661 ntBASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NCKAP1Q9Y2A7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NCKAP1Q9Y2A7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 AC026471.5-201ENST00000615068 467 ntBASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCKAP1Q9Y2A7 AF106564.1-201ENST00000607058 2553 ntBASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCKAP1Q9Y2A7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms