Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 AP006587.1-201ENST00000534129 1502 ntBASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.83■■■□□ 2.37
SHANK2Q9UPX8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 DGCR10-201ENST00000609839 495 ntBASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 ABBA01031674.1-201ENST00000635145 728 ntBASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.82■■■□□ 2.36
SHANK2Q9UPX8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 AL390955.1-201ENST00000428694 934 ntBASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 WWC2-AS2-201ENST00000578387 2183 ntBASIC29.81■■■□□ 2.36
SHANK2Q9UPX8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 PPP1R14BP5-201ENST00000440334 435 ntBASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 AC018553.1-201ENST00000616682 1458 ntBASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 AC026310.3-201ENST00000625186 2373 ntBASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 AC092865.7-201ENST00000641832 219 ntBASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SHANK2Q9UPX8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 PHGDH-210ENST00000641115 1638 ntBASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 AC113347.1-201ENST00000413321 391 ntBASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SHANK2Q9UPX8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC29.78■■■□□ 2.36
SHANK2Q9UPX8 AC092720.2-201ENST00000602388 1665 ntBASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC29.77■■■□□ 2.36
SHANK2Q9UPX8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
SHANK2Q9UPX8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 CR392000.1-201ENST00000624770 1228 ntBASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 KRT16P6-202ENST00000425692 1426 ntBASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.76■■■□□ 2.35
SHANK2Q9UPX8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms