Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
COPS3Q9UNS2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.74■□□□□ 0.43
COPS3Q9UNS2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.74■□□□□ 0.43
COPS3Q9UNS2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 AC005332.7-201ENST00000614046 2005 ntBASIC17.73■□□□□ 0.43
COPS3Q9UNS2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 ZNRF2P3-201ENST00000424200 374 ntBASIC17.73■□□□□ 0.43
COPS3Q9UNS2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 CYP21A1P-202ENST00000354927 1481 ntBASIC17.73■□□□□ 0.43
COPS3Q9UNS2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 AC093484.2-201ENST00000580996 2166 ntBASIC17.73■□□□□ 0.43
COPS3Q9UNS2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COPS3Q9UNS2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COPS3Q9UNS2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 BX323043.1-201ENST00000641006 1765 ntBASIC17.71■□□□□ 0.43
COPS3Q9UNS2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 PGM5P4-201ENST00000421970 445 ntBASIC17.71■□□□□ 0.43
COPS3Q9UNS2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COPS3Q9UNS2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
COPS3Q9UNS2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COPS3Q9UNS2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.71■□□□□ 0.42
COPS3Q9UNS2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
COPS3Q9UNS2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 TERF1P5-201ENST00000477545 1207 ntBASIC17.7■□□□□ 0.42
COPS3Q9UNS2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 AP000974.1-201ENST00000623909 2387 ntBASIC17.7■□□□□ 0.42
COPS3Q9UNS2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
COPS3Q9UNS2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms