Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC113410.3-201ENST00000623366 203 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 AC242852.2-201ENST00000615738 1807 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 ARMC10P1-201ENST00000313754 855 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 NUDT16P1-203ENST00000513809 620 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 AC092865.7-201ENST00000641832 219 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.37■□□□□ 0.05
NOTCH3Q9UM47 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 CYP21A1P-202ENST00000354927 1481 ntBASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NOTCH3Q9UM47 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 AC073195.1-201ENST00000607241 877 ntBASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH3Q9UM47 NBPF21P-201ENST00000425093 1451 ntBASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 AF106564.1-201ENST00000607058 2553 ntBASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH3Q9UM47 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.33■□□□□ 0.05
NOTCH3Q9UM47 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.33■□□□□ 0.05
NOTCH3Q9UM47 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
NOTCH3Q9UM47 PGM5P4-201ENST00000421970 445 ntBASIC15.33■□□□□ 0.05
NOTCH3Q9UM47 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.33■□□□□ 0.05
NOTCH3Q9UM47 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms