Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC011484.1-201ENST00000377652 1995 ntBASIC20.34■□□□□ 0.85
EBF1Q9UH73 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EBF1Q9UH73 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.33■□□□□ 0.85
EBF1Q9UH73 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
EBF1Q9UH73 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EBF1Q9UH73 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
EBF1Q9UH73 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EBF1Q9UH73 AL355355.2-201ENST00000442321 338 ntBASIC20.33■□□□□ 0.85
EBF1Q9UH73 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.33■□□□□ 0.85
EBF1Q9UH73 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
EBF1Q9UH73 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EBF1Q9UH73 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 MMP23A-201ENST00000234610 1017 ntBASIC20.32■□□□□ 0.84
EBF1Q9UH73 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 AC023632.3-201ENST00000521633 145 ntBASIC20.32■□□□□ 0.84
EBF1Q9UH73 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
EBF1Q9UH73 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EBF1Q9UH73 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 HTR7P1-201ENST00000538670 1336 ntBASIC20.31■□□□□ 0.84
EBF1Q9UH73 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.31■□□□□ 0.84
EBF1Q9UH73 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EBF1Q9UH73 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
EBF1Q9UH73 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EBF1Q9UH73 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EBF1Q9UH73 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.29■□□□□ 0.84
EBF1Q9UH73 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
EBF1Q9UH73 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms