Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 NBPF21P-201ENST00000425093 1451 ntBASIC19.35■□□□□ 0.69
CPNE7Q9UBL6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 KRT16P6-202ENST00000425692 1426 ntBASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 SMG8-203ENST00000578922 2178 ntBASIC19.34■□□□□ 0.69
CPNE7Q9UBL6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE7Q9UBL6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.33■□□□□ 0.69
CPNE7Q9UBL6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE7Q9UBL6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 RPS2P55-201ENST00000397318 883 ntBASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 AC012618.2-201ENST00000428058 849 ntBASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 AC107956.1-201ENST00000494359 873 ntBASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE7Q9UBL6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 AC233702.5-201ENST00000584107 538 ntBASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 AL135905.2-201ENST00000584934 1404 ntBASIC19.32■□□□□ 0.68
CPNE7Q9UBL6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE7Q9UBL6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE7Q9UBL6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms