Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.76■□□□□ 0.43
CLCF1Q9UBD9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCF1Q9UBD9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCF1Q9UBD9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLCF1Q9UBD9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 AC233702.5-201ENST00000584107 538 ntBASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLCF1Q9UBD9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 RPS2P55-201ENST00000397318 883 ntBASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 AC107956.1-201ENST00000494359 873 ntBASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 RARRES2P10-201ENST00000564312 460 ntBASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 NBPF21P-201ENST00000425093 1451 ntBASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.74■□□□□ 0.43
CLCF1Q9UBD9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 AL135905.2-201ENST00000584934 1404 ntBASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLCF1Q9UBD9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCF1Q9UBD9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCF1Q9UBD9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCF1Q9UBD9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms