Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX43Q9NXZ2 AC020907.5-201ENST00000624372 1936 ntBASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 AC239809.2-201ENST00000415381 517 ntBASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 UBE2SP1-201ENST00000450587 669 ntBASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 AL121829.2-201ENST00000620908 328 ntBASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 AP006294.2-201ENST00000641667 209 ntBASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DDX43Q9NXZ2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC093827.2-201ENST00000512654 315 ntBASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 PRKY-204ENST00000533551 1019 ntBASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 AC124016.1-201ENST00000609552 612 ntBASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DDX43Q9NXZ2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX43Q9NXZ2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 KRASP1-201ENST00000407852 552 ntBASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 AL121906.2-201ENST00000621597 723 ntBASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX43Q9NXZ2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms